5. Community occupancy models | Overview | Warning | Limitations | Parameter naming convention | Quick example | Data preparation | Fit model in JAGS | Models in Nimble | More complete example | Prepare data | JAGS Model | Nimble Model | Missing values in detection histories | Further possibilies | Fixed effects | Priors | Data augmentation | Categorical covariates | Random effects other than species | Nested random effects | Species and site random effect on detection | Quadratic covariate effects | WAIC | Species richness | Spatial predictions | Percentage of area occupied (by species) | bayesplot | Model diagnostics | Royle-Nichols model | Single-species occupancy models

6. Sample camera trap datasets and the surveyDashboard | Introduction | Setup | 1. Built-in camtrapR Sample Data | 2. Camtrap DP Data | 3. Wildlife Insights | 4. Simulated datasets | 5. Other CSVs

Introduction | Camera trap station information | Organising raw camera trap images

Methods for species and individual identification - General | Species identification | Individual identification

Tabulating species and individual records: the recordTable functions | Camera Operation | Input for subsequent analyses (single-season) | Input for subsequent analyses (multi-season)

Overview | Species presence maps | Visualising species activity data | Survey summary report

Introduction | Example applications